CIRCOS教程翻译 5.1——Drawing Basic Links

也许弄完这一章博主就要告别深圳了，无论什么感情，都将埋葬在时间中。

#bandsshow_bands            = yesfill_bands            = yesband_stroke_thickness = 2band_stroke_color     = whiteband_transparency     = 0

#ticksshow_ticks          = yesshow_tick_labels    = yes<ticks>radius           = dims(ideogram,radius_outer)orientation      = outlabel_multiplier = 1e-6color            = blacksize             = 20pthickness        = 3plabel_offset     = 5p<tick>spacing        = 1ushow_label     = no</tick><tick>spacing        = 5ushow_label     = yeslabel_size     = 20pformat         = %d</tick><tick>spacing        = 10ushow_label     = yeslabel_size     = 24pformat         = %d</tick></ticks>

#ideogram.positionradius           = 0.90rthickness        = 100pfill             = yesfill_color       = blackstroke_thickness = 2stroke_color     = black

#ideogram.labelshow_label       = yeslabel_font       = defaultlabel_radius     = dims(ideogram,radius) + 0.075rlabel_with_tag   = yeslabel_size       = 36label_parallel   = yeslabel_case       = lowerlabel_format     = eval(sprintf("chr%s",var(label)))

#ideogram<ideogram><spacing>default = 0.01rbreak   = 0.5r</spacing><<include ideogram.position.conf>><<include ideogram.label.conf>><<include bands.conf>></ideogram>

<<include colors_fonts_patterns.conf>><<include ideogram.conf>><<include ticks.conf>><image><<include etc/image.conf>></image>karyotype   = data/karyotype/karyotype.human.txtchromosomes_units = 1000000chromosomes       = hs1;hs2;hs3chromosomes_display_default = no<links>z             = 0 #跟第四章的z深度一样radius        = 0.975r #links从这个开始画bezier_radius = 0.2r #曲率<link>show         = yescolor        = black_a5 #黑色5级透明线条thickness    = 2file         = data/5/segdup.txt #文件格式如之前解释record_limit = 5000 #限制5000条</link></links><<include etc/housekeeping.conf>>