neural network and deep learning (2)
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CHAPTER 1
Using neural nets to recognize handwritten digits
The human visual system is one of the wonders of the world. Consider the following sequence of handwritten digits:
Most people effortlessly recognize those digits as 504192. That ease is deceptive. In each hemisphere of our brain, humans have a primary visual cortex, also known as V1, containing 140 million neurons, with tens of billions of connections between them. And yet human vision involves not just V1, but an entire series of visual cortices - V2, V3, V4, and V5 - doing progressively more complex image processing. We carry in our heads a supercomputer, tuned by evolution over hundreds of millions of years, and superbly adapted to understand the visual world. Recognizing handwritten digits isn't easy. Rather, we humans are stupendously, astoundingly good at making sense of what our eyes show us. But nearly all that work is done unconsciously. And so we don't usually appreciate how tough a problem our visual systems solve.
The difficulty of visual pattern recognition becomes apparent if you attempt to write a computer program to recognize digits like those above. What seems easy when we do it ourselves suddenly becomes extremely difficult. Simple intuitions about how we recognize shapes - "a 9 has a loop at the top, and a vertical stroke in the bottom right" - turn out to be not so simple to express algorithmically. When you try to make such rules precise, you quickly get lost in a morass of exceptions and caveats and special cases. It seems hopeless.
Neural networks approach the problem in a different way. The idea is to take a large number of handwritten digits, known as training examples,
and then develop a system which can learn from those training examples. In other words, the neural network uses the examples to automatically infer rules for recognizing handwritten digits. Furthermore, by increasing the number of training examples, the network can learn more about handwriting, and so improve its accuracy. So while I've shown just 100 training digits above, perhaps we could build a better handwriting recognizer by using thousands or even millions or billions of training examples.
In this chapter we'll write a computer program implementing a neural network that learns to recognize handwritten digits. The program is just 74 lines long, and uses no special neural network libraries. But this short program can recognize digits with an accuracy over 96 percent, without human intervention. Furthermore, in later chapters we'll develop ideas which can improve accuracy to over 99 percent. In fact, the best commercial neural networks are now so good that they are used by banks to process cheques, and by post offices to recognize addresses.
We're focusing on handwriting recognition because it's an excellent prototype problem for learning about neural networks in general. As a prototype it hits a sweet spot: it's challenging - it's no small feat to recognize handwritten digits - but it's not so difficult as to require an extremely complicated solution, or tremendous computational power. Furthermore, it's a great way to develop more advanced techniques, such as deep learning. And so throughout the book we'll return repeatedly to the problem of handwriting recognition. Later in the book, we'll discuss how these ideas may be applied to other problems in computer vision, and also in speech, natural language processing, and other domains.
Of course, if the point of the chapter was only to write a computer program to recognize handwritten digits, then the chapter would be much shorter! But along the way we'll develop many key ideas about neural networks, including two important types of artificial neuron (the perceptron and the sigmoid neuron), and the standard learning algorithm for neural networks, known as stochastic gradient descent. Throughout, I focus on explaining why things are done the way they are, and on building your neural networks intuition. That requires a lengthier discussion than if I just presented the basic mechanics of what's going on, but it's worth it for the deeper understanding you'll attain. Amongst the payoffs, by the end of the chapter we'll be in position to understand what deep learning is, and why it matters.
Perceptrons
What is a neural network? To get started, I'll explain a type of artificial neuron called a perceptron. Perceptrons were developed in the 1950s and 1960s by the scientist Frank Rosenblatt, inspired by earlier work by Warren McCulloch and Walter Pitts. Today, it's more common to use other models of artificial neurons - in this book, and in much modern work on neural networks, the main neuron model used is one called the sigmoid neuron. We'll get to sigmoid neurons shortly. But to understand why sigmoid neurons are defined the way they are, it's worth taking the time to first understand perceptrons.
So how do perceptrons work? A perceptron takes several binary inputs,
That's the basic mathematical model. A way you can think about the perceptron is that it's a device that makes decisions by weighing up evidence. Let me give an example. It's not a very realistic example, but it's easy to understand, and we'll soon get to more realistic examples. Suppose the weekend is coming up, and you've heard that there's going to be a cheese festival in your city. You like cheese, and are trying to decide whether or not to go to the festival. You might make your decision by weighing up three factors:
- Is the weather good?
- Does your boyfriend or girlfriend want to accompany you?
- Is the festival near public transit? (You don't own a car).
Now, suppose you absolutely adore cheese, so much so that you're happy to go to the festival even if your boyfriend or girlfriend is uninterested and the festival is hard to get to. But perhaps you really loathe bad weather, and there's no way you'd go to the festival if the weather is bad. You can use perceptrons to model this kind of decision-making. One way to do this is to choose a weight
By varying the weights and the threshold, we can get different models of decision-making. For example, suppose we instead chose a threshold of
Obviously, the perceptron isn't a complete model of human decision-making! But what the example illustrates is how a perceptron can weigh up different kinds of evidence in order to make decisions. And it should seem plausible that a complex network of perceptrons could make quite subtle decisions:
Incidentally, when I defined perceptrons I said that a perceptron has just a single output. In the network above the perceptrons look like they have multiple outputs. In fact, they're still single output. The multiple output arrows are merely a useful way of indicating that the output from a perceptron is being used as the input to several other perceptrons. It's less unwieldy than drawing a single output line which then splits.
Let's simplify the way we describe perceptrons. The condition
I've described perceptrons as a method for weighing evidence to make decisions. Another way perceptrons can be used is to compute the elementary logical functions we usually think of as underlying computation, functions such as AND
, OR
, and NAND
. For example, suppose we have a perceptron with two inputs, each with weight
NAND
gate!The NAND
example shows that we can use perceptrons to compute simple logical functions. In fact, we can use networks of perceptrons to compute any logical function at all. The reason is that the NAND
gate is universal for computation, that is, we can build any computation up out of NAND
gates. For example, we can use NAND
gates to build a circuit which adds two bits,
NAND
gates by perceptrons with two inputs, each with weight NAND
gate a little, just to make it easier to draw the arrows on the diagram:The adder example demonstrates how a network of perceptrons can be used to simulate a circuit containing many NAND
gates. And because NAND
gates are universal for computation, it follows that perceptrons are also universal for computation.
The computational universality of perceptrons is simultaneously reassuring and disappointing. It's reassuring because it tells us that networks of perceptrons can be as powerful as any other computing device. But it's also disappointing, because it makes it seem as though perceptrons are merely a new type of NAND
gate. That's hardly big news!
However, the situation is better than this view suggests. It turns out that we can devise learning algorithms which can automatically tune the weights and biases of a network of artificial neurons. This tuning happens in response to external stimuli, without direct intervention by a programmer. These learning algorithms enable us to use artificial neurons in a way which is radically different to conventional logic gates. Instead of explicitly laying out a circuit ofNAND
and other gates, our neural networks can simply learn to solve problems, sometimes problems where it would be extremely difficult to directly design a conventional circuit.
Sigmoid neurons
Learning algorithms sound terrific. But how can we devise such algorithms for a neural network? Suppose we have a network of perceptrons that we'd like to use to learn to solve some problem. For example, the inputs to the network might be the raw pixel data from a scanned, handwritten image of a digit. And we'd like the network to learn weights and biases so that the output from the network correctly classifies the digit. To see how learning might work, suppose we make a small change in some weight (or bias) in the network. What we'd like is for this small change in weight to cause only a small corresponding change in the output from the network. As we'll see in a moment, this property will make learning possible. Schematically, here's what we want (obviously this network is too simple to do handwriting recognition!):
If it were true that a small change in a weight (or bias) causes only a small change in output, then we could use this fact to modify the weights and biases to get our network to behave more in the manner we want. For example, suppose the network was mistakenly classifying an image as an "8" when it should be a "9". We could figure out how to make a small change in the weights and biases so the network gets a little closer to classifying the image as a "9". And then we'd repeat this, changing the weights and biases over and over to produce better and better output. The network would be learning.
The problem is that this isn't what happens when our network contains perceptrons. In fact, a small change in the weights or bias of any single perceptron in the network can sometimes cause the output of that perceptron to completely flip, say from
We can overcome this problem by introducing a new type of artificial neuron called a sigmoid neuron. Sigmoid neurons are similar to perceptrons, but modified so that small changes in their weights and bias cause only a small change in their output. That's the crucial fact which will allow a network of sigmoid neurons to learn.
Okay, let me describe the sigmoid neuron. We'll depict sigmoid neurons in the same way we depicted perceptrons:
At first sight, sigmoid neurons appear very different to perceptrons. The algebraic form of the sigmoid function may seem opaque and forbidding if you're not already familiar with it. In fact, there are many similarities between perceptrons and sigmoid neurons, and the algebraic form of the sigmoid function turns out to be more of a technical detail than a true barrier to understanding.
To understand the similarity to the perceptron model, suppose
What about the algebraic form of
This shape is a smoothed out version of a step function:
If
If it's the shape of
How should we interpret the output from a sigmoid neuron? Obviously, one big difference between perceptrons and sigmoid neurons is that sigmoid neurons don't just output
Exercises
- Sigmoid neurons simulating perceptrons, part I
Suppose we take all the weights and biases in a network of perceptrons, and multiply them by a positive constant,c>0 . Show that the behaviour of the network doesn't change. - Sigmoid neurons simulating perceptrons, part II
Suppose we have the same setup as the last problem - a network of perceptrons. Suppose also that the overall input to the network of perceptrons has been chosen. We won't need the actual input value, we just need the input to have been fixed. Suppose the weights and biases are such thatw⋅x+b≠0 for the inputx to any particular perceptron in the network. Now replace all the perceptrons in the network by sigmoid neurons, and multiply the weights and biases by a positive constantc>0 . Show that in the limit asc→∞ the behaviour of this network of sigmoid neurons is exactly the same as the network of perceptrons. How can this fail whenw⋅x+b=0 for one of the perceptrons?
The architecture of neural networks
In the next section I'll introduce a neural network that can do a pretty good job classifying handwritten digits. In preparation for that, it helps to explain some terminology that lets us name different parts of a network. Suppose we have the network:
The design of the input and output layers in a network is often straightforward. For example, suppose we're trying to determine whether a handwritten image depicts a "9" or not. A natural way to design the network is to encode the intensities of the image pixels into the input neurons. If the image is a
While the design of the input and output layers of a neural network is often straightforward, there can be quite an art to the design of the hidden layers. In particular, it's not possible to sum up the design process for the hidden layers with a few simple rules of thumb. Instead, neural networks researchers have developed many design heuristics for the hidden layers, which help people get the behaviour they want out of their nets. For example, such heuristics can be used to help determine how to trade off the number of hidden layers against the time required to train the network. We'll meet several such design heuristics later in this book.
Up to now, we've been discussing neural networks where the output from one layer is used as input to the next layer. Such networks are called feedforward neural networks. This means there are no loops in the network - information is always fed forward, never fed back. If we did have loops, we'd end up with situations where the input to the
However, there are other models of artificial neural networks in which feedback loops are possible. These models are calledrecurrent neural networks. The idea in these models is to have neurons which fire for some limited duration of time, before becoming quiescent. That firing can stimulate other neurons, which may fire a little while later, also for a limited duration. That causes still more neurons to fire, and so over time we get a cascade of neurons firing. Loops don't cause problems in such a model, since a neuron's output only affects its input at some later time, not instantaneously.
Recurrent neural nets have been less influential than feedforward networks, in part because the learning algorithms for recurrent nets are (at least to date) less powerful. But recurrent networks are still extremely interesting. They're much closer in spirit to how our brains work than feedforward networks. And it's possible that recurrent networks can solve important problems which can only be solved with great difficulty by feedforward networks. However, to limit our scope, in this book we're going to concentrate on the more widely-used feedforward networks.
A simple network to classify handwritten digits
Having defined neural networks, let's return to handwriting recognition. We can split the problem of recognizing handwritten digits into two sub-problems. First, we'd like a way of breaking an image containing many digits into a sequence of separate images, each containing a single digit. For example, we'd like to break the image
into six separate images,
We humans solve this segmentation problem with ease, but it's challenging for a computer program to correctly break up the image. Once the image has been segmented, the program then needs to classify each individual digit. So, for instance, we'd like our program to recognize that the first digit above,
is a 5.
We'll focus on writing a program to solve the second problem, that is, classifying individual digits. We do this because it turns out that the segmentation problem is not so difficult to solve, once you have a good way of classifying individual digits. There are many approaches to solving the segmentation problem. One approach is to trial many different ways of segmenting the image, using the individual digit classifier to score each trial segmentation. A trial segmentation gets a high score if the individual digit classifier is confident of its classification in all segments, and a low score if the classifier is having a lot of trouble in one or more segments. The idea is that if the classifier is having trouble somewhere, then it's probably having trouble because the segmentation has been chosen incorrectly. This idea and other variations can be used to solve the segmentation problem quite well. So instead of worrying about segmentation we'll concentrate on developing a neural network which can solve the more interesting and difficult problem, namely, recognizing individual handwritten digits.
To recognize individual digits we will use a three-layer neural network:
The input layer of the network contains neurons encoding the values of the input pixels. As discussed in the next section, our training data for the network will consist of many
The second layer of the network is a hidden layer. We denote the number of neurons in this hidden layer by
The output layer of the network contains 10 neurons. If the first neuron fires, i.e., has an output
You might wonder why we use
To understand why we do this, it helps to think about what the neural network is doing from first principles. Consider first the case where we use
It can do this by heavily weighting input pixels which overlap with the image, and only lightly weighting the other inputs. In a similar way, let's suppose for the sake of argument that the second, third, and fourth neurons in the hidden layer detect whether or not the following images are present:
As you've may have guessed, these four images together make up the
So if all four of these hidden neurons are firing then we can conclude that the digit is a
Supposing the neural network functions in this way, we can give a plausible explanation for why it's better to have
Now, with all that said, this is all just a heuristic. Nothing says that the three-layer neural network has to operate in the way I described, with the hidden neurons detecting simple component shapes. Maybe a clever learning algorithm will find some assignment of weights that lets us use only
Exercise
- There is a way of determining the bitwise representation of a digit by adding an extra layer to the three-layer network above. The extra layer converts the output from the previous layer into a binary representation, as illustrated in the figure below. Find a set of weights and biases for the new output layer. Assume that the first
3 layers of neurons are such that the correct output in the third layer (i.e., the old output layer) has activation at least0.99 , and incorrect outputs have activation less than0.01 .
Learning with gradient descent
Now that we have a design for our neural network, how can it learn to recognize digits? The first thing we'll need is a data set to learn from - a so-called training data set. We'll use the MNIST data set, which contains tens of thousands of scanned images of handwritten digits, together with their correct classifications. MNIST's name comes from the fact that it is a modified subset of two data sets collected by NIST, the United States' National Institute of Standards and Technology. Here's a few images from MNIST:
As you can see, these digits are, in fact, the same as those shown at the beginning of this chapter as a challenge to recognize. Of course, when testing our network we'll ask it to recognize images which aren't in the training set!
The MNIST data comes in two parts. The first part contains 60,000 images to be used as training data. These images are scanned handwriting samples from 250 people, half of whom were US Census Bureau employees, and half of whom were high school students. The images are greyscale and 28 by 28 pixels in size. The second part of the MNIST data set is 10,000 images to be used as test data. Again, these are 28 by 28 greyscale images. We'll use the test data to evaluate how well our neural network has learned to recognize digits. To make this a good test of performance, the test data was taken from a different set of 250 people than the original training data (albeit still a group split between Census Bureau employees and high school students). This helps give us confidence that our system can recognize digits from people whose writing it didn't see during training.
We'll use the notation
What we'd like is an algorithm which lets us find weights and biases so that the output from the network approximates
Why introduce the quadratic cost? After all, aren't we primarily interested in the number of images correctly classified by the network? Why not try to maximize that number directly, rather than minimizing a proxy measure like the quadratic cost? The problem with that is that the number of images correctly classified is not a smooth function of the weights and biases in the network. For the most part, making small changes to the weights and biases won't cause any change at all in the number of training images classified correctly. That makes it difficult to figure out how to change the weights and biases to get improved performance. If we instead use a smooth cost function like the quadratic cost it turns out to be easy to figure out how to make small changes in the weights and biases so as to get an improvement in the cost. That's why we focus first on minimizing the quadratic cost, and only after that will we examine the classification accuracy.
Even given that we want to use a smooth cost function, you may still wonder why we choose the quadratic function used in Equation (6). Isn't this a rather ad hoc choice? Perhaps if we chose a different cost function we'd get a totally different set of minimizing weights and biases? This is a valid concern, and later we'll revisit the cost function, and make some modifications. However, the quadratic cost function of Equation (6) works perfectly well for understanding the basics of learning in neural networks, so we'll stick with it for now.
Recapping, our goal in training a neural network is to find weights and biases which minimize the quadratic cost function
Okay, let's suppose we're trying to minimize some function,
What we'd like is to find where
One way of attacking the problem is to use calculus to try to find the minimum analytically. We could compute derivatives and then try using them to find places where
(After asserting that we'll gain insight by imagining
Okay, so calculus doesn't work. Fortunately, there is a beautiful analogy which suggests an algorithm which works pretty well. We start by thinking of our function as a kind of a valley. If you squint just a little at the plot above, that shouldn't be too hard. And we imagine a ball rolling down the slope of the valley. Our everyday experience tells us that the ball will eventually roll to the bottom of the valley. Perhaps we can use this idea as a way to find a minimum for the function? We'd randomly choose a starting point for an (imaginary) ball, and then simulate the motion of the ball as it rolled down to the bottom of the valley. We could do this simulation simply by computing derivatives (and perhaps some second derivatives) of
Based on what I've just written, you might suppose that we'll be trying to write down Newton's equations of motion for the ball, considering the effects of friction and gravity, and so on. Actually, we're not going to take the ball-rolling analogy quite that seriously - we're devising an algorithm to minimize
To make this question more precise, let's think about what happens when we move the ball a small amount
With these definitions, the expression (7) for
Summing up, the way the gradient descent algorithm works is to repeatedly compute the gradient
Notice that with this rule gradient descent doesn't reproduce real physical motion. In real life a ball has momentum, and that momentum may allow it to roll across the slope, or even (momentarily) roll uphill. It's only after the effects of friction set in that the ball is guaranteed to roll down into the valley. By contrast, our rule for choosing
To make gradient descent work correctly, we need to choose the learning rate
I've explained gradient descent when
Indeed, there's even a sense in which gradient descent is the optimal strategy for searching for a minimum. Let's suppose that we're trying to make a move
Exercises
- Prove the assertion of the last paragraph. Hint: If you're not already familiar with the Cauchy-Schwarz inequality, you may find it helpful to familiarize yourself with it.
- I explained gradient descent when
C is a function of two variables, and when it's a function of more than two variables. What happens whenC is a function of just one variable? Can you provide a geometric interpretation of what gradient descent is doing in the one-dimensional case?
People have investigated many variations of gradient descent, including variations that more closely mimic a real physical ball. These ball-mimicking variations have some advantages, but also have a major disadvantage: it turns out to be necessary to compute second partial derivatives of
How can we apply gradient descent to learn in a neural network? The idea is to use gradient descent to find the weights
There are a number of challenges in applying the gradient descent rule. We'll look into those in depth in later chapters. But for now I just want to mention one problem. To understand what the problem is, let's look back at the quadratic cost in Equation (6). Notice that this cost function has the form
An idea called stochastic gradient descent can be used to speed up learning. The idea is to estimate the gradient
To make these ideas more precise, stochastic gradient descent works by randomly picking out a small number
To connect this explicitly to learning in neural networks, suppose
Incidentally, it's worth noting that conventions vary about scaling of the cost function and of mini-batch updates to the weights and biases. In Equation (6) we scaled the overall cost function by a factor
We can think of stochastic gradient descent as being like political polling: it's much easier to sample a small mini-batch than it is to apply gradient descent to the full batch, just as carrying out a poll is easier than running a full election. For example, if we have a training set of size
Exercise
- An extreme version of gradient descent is to use a mini-batch size of just 1. That is, given a training input,
x , we update our weights and biases according to the ruleswk→w′k=wk−η∂Cx/∂wk andbl→b′l=bl−η∂Cx/∂bl . Then we choose another training input, and update the weights and biases again. And so on, repeatedly. This procedure is known as online, on-line, or incremental learning. In online learning, a neural network learns from just one training input at a time (just as human beings do). Name one advantage and one disadvantage of online learning, compared to stochastic gradient descent with a mini-batch size of, say,20 .
Let me conclude this section by discussing a point that sometimes bugs people new to gradient descent. In neural networks the cost
Implementing our network to classify digits
Alright, let's write a program that learns how to recognize handwritten digits, using stochastic gradient descent and the MNIST training data. The first thing we need is to get the MNIST data. If you're a git user then you can obtain the data by cloning the code repository for this book,
git clone https://github.com/mnielsen/neural-networks-and-deep-learning.git
If you don't use git then you can download the data and code here.
Incidentally, when I described the MNIST data earlier, I said it was split into 60,000 training images, and 10,000 test images. That's the official MNIST description. Actually, we're going to split the data a little differently. We'll leave the test images as is, but split the 60,000-image MNIST training set into two parts: a set of 50,000 images, which we'll use to train our neural network, and a separate 10,000 image validation set. We won't use the validation data in this chapter, but later in the book we'll find it useful in figuring out how to set certain hyper-parameters of the neural network - things like the learning rate, and so on, which aren't directly selected by our learning algorithm. Although the validation data isn't part of the original MNIST specification, many people use MNIST in this fashion, and the use of validation data is common in neural networks. When I refer to the "MNIST training data" from now on, I'll be referring to our 50,000 image data set, not the original 60,000 image data set**As noted earlier, the MNIST data set is based on two data sets collected by NIST, the United States' National Institute of Standards and Technology. To construct MNIST the NIST data sets were stripped down and put into a more convenient format by Yann LeCun, Corinna Cortes, and Christopher J. C. Burges. See this link for more details. The data set in my repository is in a form that makes it easy to load and manipulate the MNIST data in Python. I obtained this particular form of the data from the LISA machine learning laboratory at the University of Montreal (link)..
Apart from the MNIST data we also need a Python library calledNumpy, for doing fast linear algebra. If you don't already have Numpy installed, you can get it here.
Let me explain the core features of the neural networks code, before giving a full listing, below. The centrepiece is a Network class, which we use to represent a neural network. Here's the code we use to initialize a Network object:
class Network(): def __init__(self, sizes): self.num_layers = len(sizes) self.sizes = sizes self.biases = [np.random.randn(y, 1) for y in sizes[1:]] self.weights = [np.random.randn(y, x) for x, y in zip(sizes[:-1], sizes[1:])]
In this code, the list sizes contains the number of neurons in the respective layers. So, for example, if we want to create a Networkobject with 2 neurons in the first layer, 3 neurons in the second layer, and 1 neuron in the final layer, we'd do this with the code:
net = Network([2, 3, 1])
Note also that the biases and weights are stored as lists of Numpy matrices. So, for example net.weights[1] is a Numpy matrix storing the weights connecting the second and third layers of neurons. (It's not the first and second layers, since Python's list indexing starts at0.) Since net.weights[1] is rather verbose, let's just denote that matrix
Exercise
- Write out Equation (22) in component form, and verify that it gives the same result as the rule (4) for computing the output of a sigmoid neuron.
With all this in mind, it's easy to write code computing the output from a Network instance. We begin by defining the sigmoid function, and then using Numpy to define a vectorized form of that function:
def sigmoid(z): return 1.0/(1.0+np.exp(-z))sigmoid_vec = np.vectorize(sigmoid)
def feedforward(self, a): """Return the output of the network if "a" is input.""" for b, w in zip(self.biases, self.weights): a = sigmoid_vec(np.dot(w, a)+b) return a
Of course, the main thing we want our Network objects to do is to learn. To that end we'll give them an SGD method which implements stochastic gradient descent. Here's the code. It's a little mysterious in a few places, but I'll break it down below, after the listing.
def SGD(self, training_data, epochs, mini_batch_size, eta, test_data=None): """Train the neural network using mini-batch stochastic gradient descent. The "training_data" is a list of tuples "(x, y)" representing the training inputs and the desired outputs. The other non-optional parameters are self-explanatory. If "test_data" is provided then the network will be evaluated against the test data after each epoch, and partial progress printed out. This is useful for tracking progress, but slows things down substantially.""" if test_data: n_test = len(test_data) n = len(training_data) for j in xrange(epochs): random.shuffle(training_data) mini_batches = [ training_data[k:k+mini_batch_size] for k in xrange(0, n, mini_batch_size)] for mini_batch in mini_batches: self.update_mini_batch(mini_batch, eta) if test_data: print "Epoch {0}: {1} / {2}".format( j, self.evaluate(test_data), n_test) else: print "Epoch {0} complete".format(j)
The training_data is a list of tuples (x, y) representing the training inputs and corresponding desired outputs. The variables epochs andmini_batch_size are what you'd expect - the number of epochs to train for, and the size of the mini-batches to use when sampling. eta is the learning rate,
The code works as follows. In each epoch, it starts by randomly shuffling the training data, and then partitions it into mini-batches of the appropriate size. This is an easy way of sampling randomly from the training data. Then for each mini_batch we apply a single step of gradient descent. This is done by the codeself.update_mini_batch(mini_batch, eta), which updates the network weights and biases according to a single iteration of gradient descent, using just the training data in mini_batch. Here's the code for the update_mini_batch method:
def update_mini_batch(self, mini_batch, eta): """Update the network's weights and biases by applying gradient descent using backpropagation to a single mini batch. The "mini_batch" is a list of tuples "(x, y)", and "eta" is the learning rate.""" nabla_b = [np.zeros(b.shape) for b in self.biases] nabla_w = [np.zeros(w.shape) for w in self.weights] for x, y in mini_batch: delta_nabla_b, delta_nabla_w = self.backprop(x, y) nabla_b = [nb+dnb for nb, dnb in zip(nabla_b, delta_nabla_b)] nabla_w = [nw+dnw for nw, dnw in zip(nabla_w, delta_nabla_w)] self.weights = [w-(eta/len(mini_batch))*nw for w, nw in zip(self.weights, nabla_w)] self.biases = [b-(eta/len(mini_batch))*nb for b, nb in zip(self.biases, nabla_b)]
delta_nabla_b, delta_nabla_w = self.backprop(x, y)
I'm not going to show the code for self.backprop right now. We'll study how backpropagation works in the next chapter, including the code for self.backprop. For now, just assume that it behaves as claimed, returning the appropriate gradient for the cost associated to the training example x.
Let's look at the full program, including the documentation strings, which I omitted above. Apart from self.backprop the program is self-explanatory - all the heavy lifting is done in self.SGD andself.update_mini_batch, which we've already discussed. Theself.backprop method makes use of a few extra functions to help in computing the gradient, namely sigmoid_prime, which computes the derivative of the
"""network.py~~~~~~~~~~A module to implement the stochastic gradient descent learningalgorithm for a feedforward neural network. Gradients are calculatedusing backpropagation. Note that I have focused on making the codesimple, easily readable, and easily modifiable. It is not optimized,and omits many desirable features."""#### Libraries# Standard libraryimport random# Third-party librariesimport numpy as npclass Network(): def __init__(self, sizes): """The list ``sizes`` contains the number of neurons in the respective layers of the network. For example, if the list was [2, 3, 1] then it would be a three-layer network, with the first layer containing 2 neurons, the second layer 3 neurons, and the third layer 1 neuron. The biases and weights for the network are initialized randomly, using a Gaussian distribution with mean 0, and variance 1. Note that the first layer is assumed to be an input layer, and by convention we won't set any biases for those neurons, since biases are only ever used in computing the outputs from later layers.""" self.num_layers = len(sizes) self.sizes = sizes self.biases = [np.random.randn(y, 1) for y in sizes[1:]] self.weights = [np.random.randn(y, x) for x, y in zip(sizes[:-1], sizes[1:])] def feedforward(self, a): """Return the output of the network if ``a`` is input.""" for b, w in zip(self.biases, self.weights): a = sigmoid_vec(np.dot(w, a)+b) return a def SGD(self, training_data, epochs, mini_batch_size, eta, test_data=None): """Train the neural network using mini-batch stochastic gradient descent. The ``training_data`` is a list of tuples ``(x, y)`` representing the training inputs and the desired outputs. The other non-optional parameters are self-explanatory. If ``test_data`` is provided then the network will be evaluated against the test data after each epoch, and partial progress printed out. This is useful for tracking progress, but slows things down substantially.""" if test_data: n_test = len(test_data) n = len(training_data) for j in xrange(epochs): random.shuffle(training_data) mini_batches = [ training_data[k:k+mini_batch_size] for k in xrange(0, n, mini_batch_size)] for mini_batch in mini_batches: self.update_mini_batch(mini_batch, eta) if test_data: print "Epoch {0}: {1} / {2}".format( j, self.evaluate(test_data), n_test) else: print "Epoch {0} complete".format(j) def update_mini_batch(self, mini_batch, eta): """Update the network's weights and biases by applying gradient descent using backpropagation to a single mini batch. The ``mini_batch`` is a list of tuples ``(x, y)``, and ``eta`` is the learning rate.""" nabla_b = [np.zeros(b.shape) for b in self.biases] nabla_w = [np.zeros(w.shape) for w in self.weights] for x, y in mini_batch: delta_nabla_b, delta_nabla_w = self.backprop(x, y) nabla_b = [nb+dnb for nb, dnb in zip(nabla_b, delta_nabla_b)] nabla_w = [nw+dnw for nw, dnw in zip(nabla_w, delta_nabla_w)] self.weights = [w-(eta/len(mini_batch))*nw for w, nw in zip(self.weights, nabla_w)] self.biases = [b-(eta/len(mini_batch))*nb for b, nb in zip(self.biases, nabla_b)] def backprop(self, x, y): """Return a tuple ``(nabla_b, nabla_w)`` representing the gradient for the cost function C_x. ``nabla_b`` and ``nabla_w`` are layer-by-layer lists of numpy arrays, similar to ``self.biases`` and ``self.weights``.""" nabla_b = [np.zeros(b.shape) for b in self.biases] nabla_w = [np.zeros(w.shape) for w in self.weights] # feedforward activation = x activations = [x] # list to store all the activations, layer by layer zs = [] # list to store all the z vectors, layer by layer for b, w in zip(self.biases, self.weights): z = np.dot(w, activation)+b zs.append(z) activation = sigmoid_vec(z) activations.append(activation) # backward pass delta = self.cost_derivative(activations[-1], y) * \ sigmoid_prime_vec(zs[-1]) nabla_b[-1] = delta nabla_w[-1] = np.dot(delta, activations[-2].transpose()) # Note that the variable l in the loop below is used a little # differently to the notation in Chapter 2 of the book. Here, # l = 1 means the last layer of neurons, l = 2 is the # second-last layer, and so on. It's a renumbering of the # scheme in the book, used here to take advantage of the fact # that Python can use negative indices in lists. for l in xrange(2, self.num_layers): z = zs[-l] spv = sigmoid_prime_vec(z) delta = np.dot(self.weights[-l+1].transpose(), delta) * spv nabla_b[-l] = delta nabla_w[-l] = np.dot(delta, activations[-l-1].transpose()) return (nabla_b, nabla_w) def evaluate(self, test_data): """Return the number of test inputs for which the neural network outputs the correct result. Note that the neural network's output is assumed to be the index of whichever neuron in the final layer has the highest activation.""" test_results = [(np.argmax(self.feedforward(x)), y) for (x, y) in test_data] return sum(int(x == y) for (x, y) in test_results) def cost_derivative(self, output_activations, y): """Return the vector of partial derivatives \partial C_x / \partial a for the output activations.""" return (output_activations-y) #### Miscellaneous functionsdef sigmoid(z): """The sigmoid function.""" return 1.0/(1.0+np.exp(-z))sigmoid_vec = np.vectorize(sigmoid)def sigmoid_prime(z): """Derivative of the sigmoid function.""" return sigmoid(z)*(1-sigmoid(z))sigmoid_prime_vec = np.vectorize(sigmoid_prime)
How well does the program recognize handwritten digits? Well, let's start by loading in the MNIST data. I'll do this using a little helper program, mnist_loader.py, to be described below. We execute the following commands in a Python shell,
>>> import mnist_loader>>> training_data, validation_data, test_data = \... mnist_loader.load_data_wrapper()
Of course, this could also be done in a separate Python program, but if you're following along it's probably easiest to do in a Python shell.
After loading the MNIST data, we'll set up a Network with
>>> import network>>> net = network.Network([784, 30, 10])
Finally, we'll use stochastic gradient descent to learn from the MNIST training_data over 30 epochs, with a mini-batch size of 10, and a learning rate of
>>> net.SGD(training_data, 30, 10, 3.0, test_data=test_data)
Note that if you're running the code as you read along, it will take some time to execute - for a typical machine (as of 2014) it will likely take between one and a few minutes per training epoch. I suggest you set things running, continue to read, and periodically check the output from the code. If you're in a rush you can speed things up by decreasing the number of epochs, by decreasing the number of hidden neurons, or by using only part of the training data. Note that production code would be much, much faster: these Python scripts are intended to help you understand how neural nets work, not to be high-performance code! And, of course, once we've trained a network it can be run very quickly indeed, on almost any computing platform. For example, once we've learned a good set of weights and biases for a network, it can easily be ported to run in Javascript in a web browser, or as a native app on a mobile device. In any case, here is a partial transcript of the output of one training run of the neural network. The transcript shows the number of test images correctly recognized by the neural network after each epoch of training. As you can see, after just a single epoch this has reached 9,129 out of 10,000, and the number continues to grow,
Epoch 0: 9129 / 10000Epoch 1: 9295 / 10000Epoch 2: 9348 / 10000...Epoch 27: 9528 / 10000Epoch 28: 9542 / 10000Epoch 29: 9534 / 10000
That is, the trained network gives us a classification rate of about
Let's rerun the above experiment, changing the number of hidden neurons to
>>> net = network.Network([784, 100, 10])>>> net.SGD(training_data, 30, 10, 3.0, test_data=test_data)
Sure enough, this improves the results to
Of course, to obtain these accuracies I had to make specific choices for the number of epochs of training, the mini-batch size, and the learning rate,
>>> net = network.Network([784, 100, 10])>>> net.SGD(training_data, 30, 10, 0.001, test_data=test_data)
The results are much less encouraging,
Epoch 0: 1139 / 10000Epoch 1: 1136 / 10000Epoch 2: 1135 / 10000...Epoch 27: 2101 / 10000Epoch 28: 2123 / 10000Epoch 29: 2142 / 10000
In general, debugging a neural network can be challenging. This is especially true when the initial choice of hyper-parameters produces results no better than random noise. Suppose we try the successful 30 hidden neuron network architecture from earlier, but with the learning rate changed to
>>> net = network.Network([784, 30, 10])>>> net.SGD(training_data, 30, 10, 100.0, test_data=test_data)
Epoch 0: 1009 / 10000Epoch 1: 1009 / 10000Epoch 2: 1009 / 10000Epoch 3: 1009 / 10000...Epoch 27: 982 / 10000Epoch 28: 982 / 10000Epoch 29: 982 / 10000
The lesson to take away from this is that debugging a neural network is not trivial, and, just as for ordinary programming, there is an art to it. You need to learn that art of debugging in order to get good results from neural networks. More generally, we need to develop heuristics for choosing good hyper-parameters and a good architecture. We'll discuss all these at length through the book, including how I chose the hyper-parameters above.
Exercise
- Try creating a network with just two layers - an input and an output layer, no hidden layer - with 784 and 10 neurons, respectively. Train the network using stochastic gradient descent. What classification accuracy can you achieve?
Earlier, I skipped over the details of how the MNIST data is loaded. It's pretty straightforward. For completeness, here's the code. The data structures used to store the MNIST data are described in the documentation strings - it's straightforward stuff, tuples and lists of Numpy ndarray objects (think of them as vectors if you're not familiar with ndarrays):
"""mnist_loader~~~~~~~~~~~~A library to load the MNIST image data. For details of the datastructures that are returned, see the doc strings for ``load_data``and ``load_data_wrapper``. In practice, ``load_data_wrapper`` is thefunction usually called by our neural network code."""#### Libraries# Standard libraryimport cPickleimport gzip# Third-party librariesimport numpy as npdef load_data(): """Return the MNIST data as a tuple containing the training data, the validation data, and the test data. The ``training_data`` is returned as a tuple with two entries. The first entry contains the actual training images. This is a numpy ndarray with 50,000 entries. Each entry is, in turn, a numpy ndarray with 784 values, representing the 28 * 28 = 784 pixels in a single MNIST image. The second entry in the ``training_data`` tuple is a numpy ndarray containing 50,000 entries. Those entries are just the digit values (0...9) for the corresponding images contained in the first entry of the tuple. The ``validation_data`` and ``test_data`` are similar, except each contains only 10,000 images. This is a nice data format, but for use in neural networks it's helpful to modify the format of the ``training_data`` a little. That's done in the wrapper function ``load_data_wrapper()``, see below. """ f = gzip.open('../data/mnist.pkl.gz', 'rb') training_data, validation_data, test_data = cPickle.load(f) f.close() return (training_data, validation_data, test_data)def load_data_wrapper(): """Return a tuple containing ``(training_data, validation_data, test_data)``. Based on ``load_data``, but the format is more convenient for use in our implementation of neural networks. In particular, ``training_data`` is a list containing 50,000 2-tuples ``(x, y)``. ``x`` is a 784-dimensional numpy.ndarray containing the input image. ``y`` is a 10-dimensional numpy.ndarray representing the unit vector corresponding to the correct digit for ``x``. ``validation_data`` and ``test_data`` are lists containing 10,000 2-tuples ``(x, y)``. In each case, ``x`` is a 784-dimensional numpy.ndarry containing the input image, and ``y`` is the corresponding classification, i.e., the digit values (integers) corresponding to ``x``. Obviously, this means we're using slightly different formats for the training data and the validation / test data. These formats turn out to be the most convenient for use in our neural network code.""" tr_d, va_d, te_d = load_data() training_inputs = [np.reshape(x, (784, 1)) for x in tr_d[0]] training_results = [vectorized_result(y) for y in tr_d[1]] training_data = zip(training_inputs, training_results) validation_inputs = [np.reshape(x, (784, 1)) for x in va_d[0]] validation_data = zip(validation_inputs, va_d[1]) test_inputs = [np.reshape(x, (784, 1)) for x in te_d[0]] test_data = zip(test_inputs, te_d[1]) return (training_data, validation_data, test_data)def vectorized_result(j): """Return a 10-dimensional unit vector with a 1.0 in the jth position and zeroes elsewhere. This is used to convert a digit (0...9) into a corresponding desired output from the neural network.""" e = np.zeros((10, 1)) e[j] = 1.0 return e
I said above that our program gets pretty good results. What does that mean? Good compared to what? It's informative to have some simple (non-neural-network) baseline tests to compare against, to understand what it means to perform well. The simplest baseline of all, of course, is to randomly guess the digit. That'll be right about ten percent of the time. We're doing much better than that!
What about a less trivial baseline? Let's try an extremenly simple idea: we'll look at how dark an image is. For instance, an image of a
This suggests using the training data to compute average darknesses for each digit,
It's not difficult to find other ideas which achieve accuracies in the
If we run scikit-learn's SVM classifier using the default settings, then it gets 9,435 of 10,000 test images correct. (The code is available here.) That's a big improvement over our naive approach of classifying an image based on how dark it is. Indeed, it means that the SVM is performing roughly as well as our neural networks, just a little worse. In later chapters we'll introduce new techniques that enable us to improve our neural networks so that they perform much better than the SVM.
That's not the end of the story, however. The 9,435 of 10,000 result is for scikit-learn's default settings for SVMs. SVMs have a number of tunable parameters, and it's possible to search for parameters which improve this out-of-the-box performance. I won't explicitly do this search, but instead refer you to this blog post by Andreas Mueller if you'd like to know more. Mueller shows that with some work optimizing the SVM's parameters it's possible to get the performance up above 98.5 percent accuracy. In other words, a well-tuned SVM only makes an error on about one digit in 70. That's pretty good! Can neural networks do better?
In fact, they can. At present, well-designed neural networks outperform every other technique for solving MNIST, including SVMs. The current (2013) record is classifying 9,979 of 10,000 images correctly. This was done by Li Wan, Matthew Zeiler, Sixin Zhang, Yann LeCun, and Rob Fergus. We'll see most of the techniques they used later in the book. At that level the performance is close to human-equivalent, and is arguably better, since quite a few of the MNIST images are difficult even for humans to recognize with confidence, for example:
I trust you'll agree that those are tough to classify! With images like these in the MNIST data set it's remarkable that neural networks can accurately classify all but 21 of the 10,000 test images. Usually, when programming we believe that solving a complicated problem like recognizing the MNIST digits requires a sophisticated algorithm. But even the neural networks in the Wan et al paper just mentioned involve quite simple algorithms, variations on the algorithm we've seen in this chapter. All the complexity is learned, automatically, from the training data. In some sense, the moral of both our results and those in more sophisticated papers, is that for some problems:
Toward deep learning
While our neural network gives impressive performance, that performance is somewhat mysterious. The weights and biases in the network were discovered automatically. And that means we don't immediately have an explanation of how the network does what it does. Can we find some way to understand the principles by which our network is classifying handwritten digits? And, given such principles, can we do better?
To put these questions more starkly, suppose that a few decades hence neural networks lead to artificial intelligence (AI). Will we understand how such intelligent networks work? Perhaps the networks will be opaque to us, with weights and biases we don't understand, because they've been learned automatically. In the early days of AI research people hoped that the effort to build an AI would also help us understand the principles behind intelligence and, maybe, the functioning of the human brain. But perhaps the outcome will be that we end up understanding neither the brain nor how artificial intelligence works!
To address these questions, let's think back to the interpretation of artificial neurons that I gave at the start of the chapter, as a means of weighing evidence. Suppose we want to determine whether an image shows a human face or not:
Credits: 1. Ester Inbar. 2. Unknown. 3. NASA, ESA, G. Illingworth, D. Magee, and P. Oesch (University of California, Santa Cruz), R. Bouwens (Leiden University), and the HUDF09 Team. Click on the images for more details.
We could attack this problem the same way we attacked handwriting recognition - by using the pixels in the image as input to a neural network, with the output from the network a single neuron indicating either "Yes, it's a face" or "No, it's not a face".
Let's suppose we do this, but that we're not using a learning algorithm. Instead, we're going to try to design a network by hand, choosing appropriate weights and biases. How might we go about it? Forgetting neural networks entirely for the moment, a heuristic we could use is to decompose the problem into sub-problems: does the image have an eye in the top left? Does it have an eye in the top right? Does it have a nose in the middle? Does it have a mouth in the bottom middle? Is there hair on top? And so on.
If the answers to several of these questions are "yes", or even just "probably yes", then we'd conclude that the image is likely to be a face. Conversely, if the answers to most of the questions are "no", then the image probably isn't a face.
Of course, this is just a rough heuristic, and it suffers from many deficiencies. Maybe the person is bald, so they have no hair. Maybe we can only see part of the face, or the face is at an angle, so some of the facial features are obscured. Still, the heuristic suggests that if we can solve the sub-problems using neural networks, then perhaps we can build a neural network for face-detection, by combining the networks for the sub-problems. Here's a possible architecture, with rectangles denoting the sub-networks. Note that this isn't intended as a realistic approach to solving the face-detection problem; rather, it's to help us build intuition about how networks function. Here's the architecture:
It's also plausible that the sub-networks can be decomposed. Suppose we're considering the question: "Is there an eye in the top left?" This can be decomposed into questions such as: "Is there an eyebrow?"; "Are there eyelashes?"; "Is there an iris?"; and so on. Of course, these questions should really include positional information, as well - "Is the eyebrow in the top left, and above the iris?", that kind of thing - but let's keep it simple. The network to answer the question "Is there an eye in the top left?" can now be decomposed:
Those questions too can be broken down, further and further through multiple layers. Ultimately, we'll be working with sub-networks that answer questions so simple they can easily be answered at the level of single pixels. Those questions might, for example, be about the presence or absence of very simple shapes at particular points in the image. Such questions can be answered by single neurons connected to the raw pixels in the image.
The end result is a network which breaks down a very complicated question - does this image show a face or not - into very simple questions answerable at the level of single pixels. It does this through a series of many layers, with early layers answering very simple and specific questions about the input image, and later layers building up a hierarchy of ever more complex and abstract concepts. Networks with this kind of many-layer structure - two or more hidden layers - are called deep neural networks.
Of course, I haven't said how to do this recursive decomposition into sub-networks. It certainly isn't practical to hand-design the weights and biases in the network. Instead, we'd like to use learning algorithms so that the network can automatically learn the weights and biases - and thus, the hierarchy of concepts - from training data. Researchers in the 1980s and 1990s tried using stochastic gradient descent and backpropagation to train deep networks. Unfortunately, except for a few special architectures, they didn't have much luck. The networks would learn, but very slowly, and in practice often too slowly to be useful.
Since 2006, a set of techniques has been developed that enable learning in deep neural nets. These deep learning techniques are based on stochastic gradient descent and backpropagation, but also introduce new ideas. These techniques have enabled much deeper (and larger) networks to be trained - people now routinely train networks with 5 to 10 hidden layers. And, it turns out that these perform far better on many problems than shallow neural networks, i.e., networks with just a single hidden layer. The reason, of course, is the ability of deep nets to build up a complex hierarchy of concepts. It's a bit like the way conventional programming languages use modular design and ideas about abstraction to enable the creation of complex computer programs. Comparing a deep network to a shallow network is a bit like comparing a programming language with the ability to make function calls to a stripped down language with no ability to make such calls. Abstraction takes a different form in neural networks than it does in conventional programming, but it's just as important.
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