caffe特征提取/C++数据格式转换
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Caffe生成的数据分为2种格式:Lmdb 和 Leveldb
- 它们都是键/值对(Key/Value Pair)嵌入式数据库管理系统编程库。
- 虽然lmdb的内存消耗是leveldb的1.1倍,但是lmdb的速度比leveldb快10%至15%,更重要的是lmdb允许多种训练模型同时读取同一组数据集。
- 因此lmdb取代了leveldb成为Caffe默认的数据集生成格式。
create_babyface.sh调用的convertData的源代码如下:
#include<sys/types.h>#include<sys/stat.h>#include<dirent.h>#include <stdio.h>#include<string.h>#include <fstream> // NOLINT(readability/streams)#include <string>#include <vector>#include "boost/scoped_ptr.hpp"#include "glog/logging.h"#include "google/protobuf/text_format.h"#include "stdint.h"#include "caffe/proto/caffe.pb.h"#include "caffe/util/db.hpp"#include <opencv/cv.h>#include <opencv/highgui.h>using caffe::Datum;using boost::scoped_ptr;using std::string;namespace db = caffe::db;using namespace std;const int kCIFARSize = 32;const int kCIFARChannelBytes = 1024;const int kCIFARImageNBytes = 3072;const int kCIFARBatchSize = 1000;//1000 for a batch!const int kCIFARTrainBatches = 5;void read_image(std::ifstream* file, int* label, char* buffer) { char label_char; file->read(&label_char, 1); *label = label_char; file->read(buffer, kCIFARImageNBytes); return;}//Read IPLimage to the buffervoid read_image( IplImage* out, char* buffer, char* RC, char* GC, char* BC){ int x,y; int idx =0; for(y = 0; y<out->height; y++){ char *ptr= out->imageData + y * out->widthStep; for( x = 0;x< out->width;x++){ idx =y*out->height + x; BC[idx]= ptr[3*x]; GC[idx]= ptr[3*x+1]; RC[idx]= ptr[3*x+2]; //这样就可以添加自己的操作,这里我使三通道颜色一样,就彩色图转黑白图了 } } memcpy( buffer ,RC, kCIFARChannelBytes*sizeof(char) ); memcpy( buffer+ kCIFARChannelBytes*sizeof(char) , GC,kCIFARChannelBytes*sizeof(char) ); memcpy( buffer+ kCIFARChannelBytes*sizeof(char) *2, BC,kCIFARChannelBytes*sizeof(char) ); return;}//Travel the folder and load the filelist!//使用linux dirent遍历目录 int traveldir(char* path ,int depth, vector<string > &FileList){ DIR* d;// a struct dirent *file; struct stat sb; if( !(d=opendir(path ) ) ){ printf("Read path %s error,wishchin! ", path); return -1; } while( (file= readdir(d ) ) != NULL ) { if(0== strncmp(file->d_name, ".", 1 ) ) continue; char filename[256]; strcpy( filename , file->d_name ); string Sfilename(filename);string Spath(path); Spath.append(Sfilename); FileList.push_back(Spath); } if( stat(file->d_name, &sb)>=0 && S_ISDIR(sb.st_mode) && depth <=4 ) traveldir(file->d_name,depth+1,FileList); closedir(d); return 1;}// convert the data to the lmdb format !void convert_dataset( const string& input_folder, const string& output_folder, const string& db_type) { scoped_ptr<db::DB> train_db(db::GetDB(db_type)); train_db->Open(output_folder + "/babyface_train_" + db_type, db::NEW); scoped_ptr<db::Transaction> txn(train_db->NewTransaction()); char* path=new char[256]; int depth=2; vector<string > FileList(0); // Data buffer int label; IplImage* ImageS; char str_buffer[kCIFARImageNBytes]; char* RC=new char[kCIFARChannelBytes]; char* GC=new char[kCIFARChannelBytes]; char* BC=new char[kCIFARChannelBytes]; Datum datum; datum.set_channels(3); datum.set_height(kCIFARSize); datum.set_width(kCIFARSize); //"Writing Training data"//载入训练数据 LOG(INFO) << "Writing Training data"; strcpy(path,( input_folder+(string)("train1") ).c_str() ); traveldir( path , depth, FileList); for (int fileid = 0; fileid < kCIFARTrainBatches; ++fileid) { // Open files LOG(INFO) << "Training Batch " << fileid + 1; snprintf(str_buffer, kCIFARImageNBytes, "/data_batch_%d.bin", fileid + 1); //CHECK(data_file) << "Unable to open train file #" << fileid + 1; label=1;//The Batch has 10000 pics! for (int itemid = 0; itemid < kCIFARBatchSize; ++itemid) { ImageS =cvLoadImage( (FileList[ fileid*kCIFARTrainBatches + itemid] ).c_str() ); read_image( ImageS, str_buffer, RC, GC, BC); datum.set_label(label);//datum.set_label(label); datum.set_data(str_buffer, kCIFARImageNBytes); int length = snprintf(str_buffer, kCIFARImageNBytes, "%05d", fileid * kCIFARBatchSize + itemid); string out; CHECK(datum.SerializeToString( &out) ) ; txn->Put(string(str_buffer, length), out);//The main sentence ,put data to the txn! } } strcpy(path,( input_folder+(string)("train0") ).c_str() ); traveldir( path , depth, FileList); for (int fileid = 0; fileid < kCIFARTrainBatches; ++fileid) { LOG(INFO) << "Training Batch " << fileid + 1; snprintf(str_buffer, kCIFARImageNBytes, "/data_batch_%d.bin", fileid + 1); //CHECK(data_file) << "Unable to open train file #" << fileid + 1; label=0;//The Batch has 10000 pics! for (int itemid = 0; itemid < kCIFARBatchSize; ++itemid) { ImageS =cvLoadImage( (FileList[ fileid*kCIFARTrainBatches + itemid] ).c_str() ); read_image( ImageS, str_buffer, RC, GC, BC); datum.set_label(label);//datum.set_label(label); datum.set_data(str_buffer, kCIFARImageNBytes); int length = snprintf(str_buffer, kCIFARImageNBytes, "%05d", fileid * kCIFARBatchSize + itemid); string out; CHECK(datum.SerializeToString( &out) ) ; txn->Put(string(str_buffer, length), out);//The main sentence ,put data to the txn! } } txn->Commit(); train_db->Close(); //写入测试数据! LOG(INFO) << "Writing Testing data"; scoped_ptr<db::DB> test_db(db::GetDB(db_type)); test_db->Open(output_folder + "/babyface_test_" + db_type, db::NEW); txn.reset(test_db->NewTransaction()); strcpy(path,( input_folder+(string)("test1") ).c_str() ); traveldir( path , depth, FileList); for (int fileid = 0; fileid < 2; ++fileid) { LOG(INFO) << "Training Batch " << fileid + 1; snprintf(str_buffer, kCIFARImageNBytes, "/data_batch_%d.bin", fileid + 1); label=1;//The Batch has 10000 pics! for (int itemid = 0; itemid < kCIFARBatchSize; ++itemid) { ImageS =cvLoadImage( (FileList[ fileid*2 + itemid] ).c_str() ); read_image( ImageS, str_buffer, RC, GC, BC); datum.set_label(label);//datum.set_label(label); datum.set_data(str_buffer, kCIFARImageNBytes); int length = snprintf(str_buffer, kCIFARImageNBytes, "%05d", fileid * kCIFARBatchSize + itemid); string out; CHECK(datum.SerializeToString( &out) ) ; txn->Put(string(str_buffer, length), out);//The main sentence ,put data to the txn! } } strcpy(path,( input_folder+(string)("test0") ).c_str() ); traveldir( path , depth, FileList); for (int fileid = 0; fileid < 2; ++fileid) { LOG(INFO) << "Training Batch " << fileid + 1; snprintf(str_buffer, kCIFARImageNBytes, "/data_batch_%d.bin", fileid + 1); label=0;//The Batch has 10000 pics! for (int itemid = 0; itemid < kCIFARBatchSize; ++itemid) { ImageS =cvLoadImage( (FileList[ fileid*2 + itemid] ).c_str() ); read_image( ImageS, str_buffer, RC, GC, BC); datum.set_label(label);//datum.set_label(label); datum.set_data(str_buffer, kCIFARImageNBytes); int length = snprintf(str_buffer, kCIFARImageNBytes, "%05d", fileid * kCIFARBatchSize + itemid); string out; CHECK(datum.SerializeToString( &out) ) ; txn->Put(string(str_buffer, length), out);//The main sentence ,put data to the txn! } } txn->Commit(); test_db->Close(); cvReleaseImage(&ImageS); delete [] RC;delete [] GC;delete [] BC;}int main(int argc, char** argv) { if (argc != 4) { printf("This script converts the CIFAR dataset to the leveldb format used\n" "by caffe to perform classification.\n" "Usage:\n" " convert_cifar_data input_folder output_folder db_type\n" "Where the input folder should contain the binary batch files.\n" "The CIFAR dataset could be downloaded at\n" " http://www.cs.toronto.edu/~kriz/cifar.html\n" "You should gunzip them after downloading.\n"); } else { google::InitGoogleLogging(argv[0]); convert_dataset(string(argv[1]), string(argv[2]), string(argv[3])); } return 0;}
后记:目的是载入32×32的三通道图像,直接输入3072维的char向量进行训练,至于怎样训练网络,还得仔细查看一下。
后记:代码出现 coredump 问题,利用 gcc path/...bin -o coredemo -g ,出现caffe.pb.h 包含丢失现象,why???
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