图像处理珍藏版本汇总

Matlab标准工具箱里关于计算机视觉和机器学习的工具箱主要有：Statistics and Machine Learning Toolbox 、Optimization Toolbox、Global Optimization Toolbox 、Neural Network Toolbox、Image Processing Toolbox和Image Processing Toolbox。
Statistics and Machine Learning Toolbox
包括统计和机器学习的库，可以进行降维，包括序列特征选择、逐步回归、主成分分析（PCA）、正则化等。其他包括监督和非监督学习算法，包括SVM、boosted and bagged决策树、k近邻、k均值聚类、k中心点聚类、层次聚类、高斯混合模型（GMM）和隐马尔科夫模型。
离散分布有二次分布、几何分布、超几何分布、多项式分布、负二项分布、泊松分布、均匀分布连续分布有贝塔分布、Birnbaum-Saunders分布、Burr Type XII分布、卡方分布、指数分布、极值分布、F分布、伽马分布、广义极值分布、高斯混合分布、广义帕累托分布、逆高斯分布、核广义函数、logistic分布、Loglogistic分布、对数正态分布、Nakagami分布、非中心卡方分布、非中心f分布、非中心t分布、正态分布、分段线性分布、瑞利分布、莱斯分布、学生的t分布、t Location-Scale分布、三角分布、均匀分布(连续)、威布尔分布；多变量分布有Copula分布、Wishart逆分布、多元正态分布、多元t-分布、Wishart分布。
线性回归有多元线性回归、逐步回归、多元回归、正则化、混合；广义线性模型有广义线性回归、逐步回归、正则化、混合；非线性回归有非线性模型、混合；方差分析和协方差分析。
监督学习里，除了上面的，还有分类树回归树、SVM、贝叶斯分类器、最近邻；非监督学习有层次聚类、k均值聚类、k中心点聚类、高斯混合模型（GMM）、隐马尔科夫模型；集成学习有Boosting、Bagging、随机子空间法。

Optimization Toolbox
提供寻找最小值和最大值的工具箱，包括线性规划、混合整型线性规划、二次规划、非线性规划、非线性最小二乘。

Global Optimization Toolbox
全局最优化工具箱，包括全局搜索、多初始点、模式搜索、粒子群算法、遗传算法和模拟退火。

Neural Network Toolbox
神经网络工具箱，提供复杂的非线性系统并实现监督学习（回归）和非监督学习任务（自适应网络SOM和完全层）。

Image Processing Toolbox
提供图像处理、分析、可视化和算法的工具箱。包括基本的读入读出、显示、交互、几何变换（旋转、改变尺寸）、合成、增强、滤波。图像分析包括对象分析（找到物体边界、Hough变换）、区域属性（度量区域属性、等高线图、均值方差）、纹理分析（熵、灰度共生矩阵）、图像质量（MSE）、图像分割（主动轮廓、快速行进算法、基于地动距离分割、像素梯度权重、阈值分割）、图像转换（随机转换、Hough变换、反转、图像距离）。各种颜色空间的转换（RGB、NTESC、XYZ、LAB、CBCR）和代码生成（区域极大值、图像直方图）。

Computer Vision System Toolbox
可以目标检测、跟踪、特征检测和提取、特征匹配、立体视觉、摄像机标定、运动物体检测、视频处理。
特征提取有BRISK、FAST、Harris、最小特征值、MSER特征、SURF特征、HOG特征。

 http://www.dice.ucl.ac.be/mlg/

半监督流形学习（流形正则化）

http://manifold.cs.uchicago.edu/

模式识别和神经网络工具箱

http://www.ncrg.aston.ac.uk/netlab/index.php

机器学习开源代码

http://mloss.org/software/tags/large-scale-learning/

统计学开源代码

http://www.wessa.net/

matlab各种工具箱链接

http://www.tech.plym.ac.uk/spmc/links/matlab/matlab_toolbox.html

统计学学习经典在线教材

http://www.statistics4u.info/

机器学习开源源代码

http://mloss.org/software/language/matlab/

 http://www.dice.ucl.ac.be/mlg/

半监督流形学习（流形正则化）

http://manifold.cs.uchicago.edu/

模式识别和神经网络工具箱

http://www.ncrg.aston.ac.uk/netlab/index.php

机器学习开源代码

http://mloss.org/software/tags/large-scale-learning/

统计学开源代码

http://www.wessa.net/

matlab各种工具箱链接

http://www.tech.plym.ac.uk/spmc/links/matlab/matlab_toolbox.html

统计学学习经典在线教材

http://www.statistics4u.info/

机器学习开源源代码

http://mloss.org/software/language/matlab/

Kernel Methods

Alexander J. Smola

Maximum Mean Discrepancy (MMD), Hilbert-Schmidt Independence Criterion (HSIC)

Bernhard Schölkopf

Kernel PCA

James T Kwok

Pre-Image, Kernel Learning, Core Vector Machine(CVM)

Jieping Ye

Kernel Learning, Linear Discriminate Analysis, Dimension Deduction

Multi-Task Learning

Andreas Argyriou

Multi-Task Feature Learning

Charles A. Micchelli

Multi-Task Feature Learning, Multi-Task Kernel Learning

Massimiliano Pontil

Multi-Task Feature Learning

Yiming Ying

Multi-Task Feature Learning, Multi-Task Kernel Learning

 

Semi-supervised Learning

Partha Niyogi

Manifold Regularization, Laplacian Eigenmaps

Mikhail Belkin

Manifold Regularization, Laplacian Eigenmaps

Vikas Sindhwani

Manifold Regularization

Xiaojin Zhu

Graph-based Semi-supervised Learning

Multiple Instance Learning

Sally A Goldman

EM-DD, DD-SVM, Multiple Instance Semi Supervised Learning(MISS)

Dimensionality Reduction

Neil Lawrence

Gaussian Process Latent Variable Models (GPLVM)

Lawrence K. Saul

Maximum Variance Unfolding(MVU), Semidefinite Embedding(SDE)

Machine Learning

Michael I. Jordan

Graphical Models

John Lafferty

Diffusion Kernels, Graphical Models

Daphne Koller

Logic, Probability

Zhang Tong

Theoretical Analysis of Statistical Algorithms, Multi-task Learning, Graph-based Semi-supervised Learning

Zoubin Ghahramani

Bayesian approaches to machine learning

Machine Learning @ Toronto

Statitiscal Machine Learning & Optimization

Jerome H Friedman

GLasso, Statistical view of AdaBoost, Greedy Function Approximation

Thevor Hastie

Lasso

Stephen Boyd

Convex Optimization

C.J Lin

Libsvm

 http://www.dice.ucl.ac.be/mlg/

半监督流形学习（流形正则化）

http://manifold.cs.uchicago.edu/

模式识别和神经网络工具箱

http://www.ncrg.aston.ac.uk/netlab/index.php

机器学习开源代码

http://mloss.org/software/tags/large-scale-learning/

统计学开源代码

http://www.wessa.net/

matlab各种工具箱链接

http://www.tech.plym.ac.uk/spmc/links/matlab/matlab_toolbox.html

统计学学习经典在线教材

http://www.statistics4u.info/

机器学习开源源代码

http://mloss.org/software/language/matlab/

======================资源====================

以前转过一个计算机视觉领域内的牛人简介，现在转一个更宽范围内的牛人简介：

 

http://people.cs.uchicago.edu/~niyogi/

http://www.cs.uchicago.edu/people/

http://pages.cs.wisc.edu/~jerryzhu/

http://www.kyb.tuebingen.mpg.de/~chapelle

http://people.cs.uchicago.edu/~xiaofei/

http://www.cs.uiuc.edu/homes/dengcai2/

http://www.kyb.mpg.de/~bs

http://research.microsoft.com/~denzho/

http://www-users.cs.umn.edu/~kumar/dmbook/index.php#item5           

(resources for the book of the introduction of data mining by Pang-ning Tan et.al. )（国内已经有相应的中文版）

http://www.cs.toronto.edu/~roweis/lle/publications.html    (lle算法源代码及其相关论文)

http://dataclustering.cse.msu.edu/index.html#software（data clustering）

http://www.cs.toronto.edu/~roweis/     (里面有好多资源)

http://www.cse.msu.edu/~lawhiu/  (manifold learning)

http://www.math.umn.edu/~wittman/mani/ (manifold learning demo in matlab)

http://www.iipl.fudan.edu.cn/~zhangjp/literatures/MLF/INDEX.HTM  (manifold learning in matlab)

http://videolectures.net/mlss05us_belkin_sslmm/   (semi supervised learning with manifold method by Belkin)

http://isomap.stanford.edu/    (isomap主页)

http://web.mit.edu/cocosci/josh.html  MIT    TENENBAUM J B主页

http://web.engr.oregonstate.edu/~tgd/    （国际著名的人工智能专家 Thomas G. Dietterich）

http://www.cs.berkeley.edu/~jordan/ （MIchael I.Jordan）

http://www.cs.cmu.edu/~awm/  (Andrew W. Moore's  homepage)

http://learning.cs.toronto.edu/ （加拿大多伦多大学机器学习小组）

http://www.cs.cmu.edu/~tom/ （Tom Mitchell，里面有与教材匹配的slide。）

 http://www.dice.ucl.ac.be/mlg/

半监督流形学习（流形正则化）

http://manifold.cs.uchicago.edu/

模式识别和神经网络工具箱

http://www.ncrg.aston.ac.uk/netlab/index.php

机器学习开源代码

http://mloss.org/software/tags/large-scale-learning/

统计学开源代码

http://www.wessa.net/

matlab各种工具箱链接

http://www.tech.plym.ac.uk/spmc/links/matlab/matlab_toolbox.html

统计学学习经典在线教材

http://www.statistics4u.info/

机器学习开源源代码

http://mloss.org/software/language/matlab/

蔡登：http://www.cad.zju.edu.cn/home/dengcai/,Han Jiawei老师的学生，博士毕业后回浙大

任教，也算是国内年轻一代的牛人了。

万小军：https://sites.google.com/site/wanxiaojun1979/，得翻墙才能看到主页。主要

研究方向是文本挖掘和语义计算。自然语言方向好会议发了很多文章。

张磊：http://research.microsoft.com/en-us/um/people/leizhang/

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原文地址：http://blog.csdn.net/playoffs/article/details/7588597

李航：http://research.microsoft.com/en- us/people/hangli/，是MSRA Web Search and 

Mining Group高级研究员和主管，主要研究领域是信息检索，自然语言处理和统计学习。

近年来，主要与人合作使用机器学习方法对信息检索中排序，相关性等问题的 研究。曾在

人大听过一场他的讲座，对实际应用的问题抽象，转化和解决能力值得学习。

周志华：http://cs.nju.edu.cn/zhouzh/，是南京大学的杰青，机器学习和数据挖掘方面

国内的领军人物，其好几个研究生都 进入了美国一流高校如uiuc，cmu等学习和深造。周教授

在半监督学习，multi-label学习和集成学习方面在国际上有一定的影响力。另外，他也 

是ACML的创始人。人也很nice，曾经发邮件咨询过一个naive的问题，周老师还在百忙之中

回复了我，并对我如何发邮件给了些许建议。

杨强：http://www.cse.ust.hk/~qyang/，香港科技大学教 授，也是KDD 2012的会议主席，

可见功力非同一般。杨教授是迁移学习的国际领军人物，曾经的中国第一位acm全球冠军上

交的戴文渊硕士期间就是跟他合作发表了一系列 高水平的文章。还有，杨教授曾有一个关

于机器学习和数据挖掘有意思的比喻：比如你训练一只狗，若干年后，如果它忽然有一天能

帮你擦鞋洗衣服，那么这就是数 据挖掘；要是忽然有一天，你发现狗发装成一个老太婆

消失了，那么这就是机器学习。

李建中：http://db.hit.edu.cn/jianzhongli/，哈工大和黑大共有教授，是分布式数据库

的领军人物。近年来，其团队 在不确定性数据，sensor network方面也发表了一系列有名

文章。李教授为人师表，教书育人都做得了最好，在圈内是让人称道的好老师和好学者。

唐杰：http://keg.cs.tsinghua.edu.cn/jietang/，清华大学副教授，是图挖掘方面的专家。

他主持设计和实现的Arnetminer是国内领先的图挖掘系统，该系统也是多个会议的支持商。

张钹：http://www.csai.tsinghua.edu.cn/personal_homepage/zhang_bo/index.html 清华

大学教授，中科院院士，。现任清华大学信息技术研究院指导委员会主任，微软亚洲研究院

技术顾问等。主要从事人工智能、神经网络、遗传算法、智能机器 人、模式识别以及智能控

制等领域的研究工作。在过去二十多年中，张钹教授系统地提出了问题求解的商空间理
论。近年来，他建立了神经与认知计算研究中心以及多媒体信息处理研究组。该研究组已在

图像和视频的分析与检索方面取得一些重要研究成果。

刘铁岩：http://research.microsoft.com/en-us/people/tyliu/ MSRA研究主管，

是learning to rank的国际知名学者。近年逐步转向管理，研究兴趣则开始关注计算广告学方面。

王海峰：http://ir.hit.edu.cn/~wanghaifeng/ 信息检索，自然语言处理，机器翻译方面

的专家，ACL的副主席，百度高级科学家。近年，在百度主持研发了百度翻译产品。

何晓飞：http://people.cs.uchicago.edu/~xiaofei/ 浙江大学教授，多媒体处理，

图像检索以及流型学习的国际领先学者。

朱军：http://www.ml-thu.net/~jun/ 清华大学副教授，机器学习绝对重量级新星。

主要研究领域是latent variable models, large-margin learning, Bayesian nonparametrics,

 and sparse learning in high dimensions. 他也是今年龙星计划的机器学习领域的主讲人之一。

----------------------------------------------------------------------------------------------

吴军：http://www.cs.jhu.edu/~junwu/ 腾讯副总裁，前google研究员。

著名《数学之美》和《浪潮之巅》系列的作者。

张栋：http://weibo.com/machinelearning 前百度科学家和google研究员，机器学习工业界的代表人物之一。

戴文渊：http://apex.sjtu.edu.cn/apex_wiki/Wenyuan_Dai 现百度凤巢ctr预估组leader。

前ACM大赛冠军，硕士期间一系列transfer learning方面的高水平论文让人瞠目结舌。

CVonline

http://homepages.inf.ed.ac.uk/rbf/CVonline

http://homepages.inf.ed.ac.uk/rbf/CVonline/unfolded.htm

http://homepages.inf.ed.ac.uk/rbf/CVonline/CVentry.htm

 

李子青的大作：

Markov Random Field Modeling in Computer Vision

http://www.cbsr.ia.ac.cn/users/szli/mrf_book/book.html

Handbook of Face Recognition (PDF)

http://www.umiacs.umd.edu/~shaohua/papers/zhou04hfr.pdf

 

 

 

张正友的有关参数鲁棒估计著作：

Parameter Estimation Techniques:A Tutorial with Application to Conic Fitting 

 http://research.microsoft.com/~zhang/INRIA/Publis/Tutorial-Estim/Main.html

 

Andrea Fusiello“计算机视觉中的几何”教程：Elements of Geometric Computer Vision

http://homepages.inf.ed.ac.uk/rbf/CVonline/LOCAL_COPIES/FUSIELLO4/tutorial.html#x1-520007

 

 

有关马尔可夫蒙特卡罗方法的资料：

An introduction to Markov chain Monte Carlo

http://homepages.inf.ed.ac.uk/rbf/CVonline/LOCAL_COPIES/SENEGAS/mcmc.html

Markov Chain Monte Carlo for Computer Vision--- A tutorial at ICCV05 

       http://civs.stat.ucla.edu/MCMC/MCMC_tutorial.htm

 

 

 

几个计算机视觉研究工具

Machine Vision Toolbox for Matlab

http://www.petercorke.com/Machine%20Vision%20Toolbox.html

Matlab and Octave Function for Computer Vision and Image Processing

http://www.csse.uwa.edu.au/~pk/research/matlabfns/

 

Bayes Net Toolbox for Matlab

http://www.cs.ubc.ca/~murphyk/Software/BNT/bnt.html

OpenCV (Chinese)

http://www.opencv.org.cn/index.php/%E9%A6%96%E9%A1%B5

 

Gandalf (A Computer Vision and Numerical Algorithm Labrary)

http://gandalf-library.sourceforge.net/

 

CMU Computer Vision Home Page

http://www.cs.cmu.edu/afs/cs/project/cil/ftp/html/vision.html

 

Machine Learning Resource Links

http://www.cse.ust.hk/~ivor/resource.htm

 

 

牛人主页：

David Lowe (SIFT) (很帅的一个老头哦 ^ ^)

http://www.cs.ubc.ca/~lowe/

 

Andrea Vedaldi (SIFT)

http://vision.ucla.edu/~vedaldi/index.html

 

Pedro F. Felzenszwalb

http://people.cs.uchicago.edu/~pff/

 

Dougla Dlanman (Brown的一个研究生，在其主页上搜集了大量算法教程和源码)

http://mesh.brown.edu/dlanman/courses.html

 

Jianbo Shi (Ncuts 的始作俑者)

http://www.cis.upenn.edu/~jshi/

 

Active Vision Group (Oxford的一个机器视觉研究团队，特色是SLAM，监视，导航)

http://www.robots.ox.ac.uk/ActiveVision/index.html

 

测试图片或视频：

Middlebury College‘s Stereo Vision Data Set

http://cat.middlebury.edu/stereo/data.html

1.平面操作工具箱

http://cathy.ijs.si/~leon/planman.html

2.SimMechanics 工具箱 (这个好像不是免费的)
http://www.mathworks.com/access/helpdesk/help/toolbox/physmod/mech/mech.shtml

3.gaot工具箱(遗传算法工具箱)
http://www.dytrol.com/viewFile.asp?Boardid=11&ID=263

4.Optimization Toolbox 2.2
http://www.ttdown.com/SoftDown.asp?ID=25782

5.Vibration Toolbox
http://www.cs.wright.edu/people/faculty/jslater/vtoolbox/vtoolbox.html

6.MATLAB机器视觉工具箱
http://www.cat.csiro.au/cmst/staff/pic/vision-tb.html

7.Polynomial Toolbox 
http://www.polyx.com/frm-main-download.htm

8.TIME-FREQUENCY TOOLBOX
http://crttsn.univ-nantes.fr/~auger/tftb.html

9.Uvi_Wave Wavelet Toolbox
http://www.gts.tsc.uvigo.es/~wavelets/

10.THE NNSYSID TOOLBOX - Version 2
http://kalman.iau.dtu.dk/research/control/nnsysid.html

11.Camera calibration toolbox
http://www.ee.oulu.fi/~jth/calibr/

12.Virtual Control Lab
http://www.esr.ruhr-uni-bochum.de/VCLab/

13.有限元工具箱
http://www.dytrol.com/viewFile.asp?Boardid=11&ID=264

14.最速梯度法
http://www.dytrol.com/viewFile.asp?Boardid=11&ID=265

MATLAB Toolboxes

ZSM (zero sum multinomial)
http://mcgillb.user.msu.edu/zsmcode.html

Binaural-modeling software for MATLAB/Windows
http://www.lifesci.sussex.ac.uk/home/Michael_Akeroyd/download2.html

Statistical Parametric Mapping (SPM)
http://www.fil.ion.ucl.ac.uk/spm/ext/

BOOTSTRAP MATLAB TOOLBOX
http://www.csp.curtin.edu.au/downloads/bootstrap_toolbox.html

The DSS package for MATLAB
DSS Matlab package contains algorithms for performing linear, deflation and symmetric DSS.
http://www.cis.hut.fi/projects/dss/package/

Psychtoolbox
http://www.psychtoolbox.org/download.html

Multisurface Method Tree with MATLAB
http://www.cs.wisc.edu/~olvi/uwmp/msmt.html

A Matlab Toolbox for every single topic !
http://stommel.tamu.edu/~baum/toolboxes.html 
eg. BrainStorm - MEG and EEG data visualization and processing

CLAWPACK is a software package designed to compute numerical solutions to hyperbolic partial differential equations using a wave propagation approach
http://www.amath.washington.edu/~claw/

DIPimage - Image Processing Toolbox

PRTools - Pattern Recognition Toolbox (+ Neural Networks)

NetLab - Neural Network Toolbox

FSTB - Fuzzy Systems Toolbox

Fusetool - Image Fusion Toolbox
http://www.metapix.de/toolbox.htm

WAVEKIT - Wavelet Toolbox

Gat - Genetic Algorithm Toolbox

TSTOOL is a MATLAB software package for nonlinear time series analysis.
TSTOOL can be used for computing: Time-delay reconstruction, Lyapunov exponents, Fractal dimensions, Mutual information, Surrogate data tests, Nearest neighbor statistics, Return times, Poincare sections, Nonlinear prediction
http://www.physik3.gwdg.de/tstool/

MATLAB / Data description toolbox 
A Matlab toolbox for data description, outlier and novelty detection 
March 26, 2004 - D.M.J. Tax 
http://www-ict.ewi.tudelft.nl/~davidt/dd_tools/dd_manual.html

MBE
http://www.pmarneffei.hku.hk/mbetoolbox/

Betabolic network toolbox for Matlab 
http://www.molgen.mpg.de/~lieberme/pages/network_matlab.html

Pharmacokinetics toolbox for Matlab 
http://page.inf.fu-berlin.de/~lieber/seiten/pbpk_toolbox.html

The Spider
The spider is intended to be a complete object orientated environment for machine learning in Matlab. Aside from easy use of base learning algorithms, algorithms can be plugged together and can be compared with, e.g model selection, statistical tests and visual plots. This gives all the power of objects (reusability, plug together, share code) but also all the power of Matlab for machine learning research.
http://www.kyb.tuebingen.mpg.de/bs/people/spider/index.html

Schwarz-Christoffel Toolbox
http://www.mathworks.com/matlabcentral/fileexchange/loadFile.do?objectId=1316&objectType=file#

XML Toolbox 
http://www.mathworks.com/matlabcentral/fileexchange/loadFile.do?objectId=4278&objectType=file

FIR/TDNN Toolbox for MATLAB 
Beta version of a toolbox for FIR (Finite Impulse Response) and TD (Time Delay) Neural Networks. 
http://www.cs.utep.edu/interval-comp/dagstuhl.03/oish.pdf

Misc.

http://www.dcsc.tudelft.nl/Research/Software/index.html

Astronomy

Saturn and Titan trajectories ... MALTAB astronomy
http://sprg.ssl.berkeley.edu/~abrecht/Matlab-codes/

Audio

MA Toolbox for Matlab Implementing Similarity Measures for Audio
http://www.oefai.at/~elias/ma/index.html

MAD - Matlab Auditory Demonstrations
http://www.dcs.shef.ac.uk/~martin/MAD/docs/mad.htm

Music Analysis - Toolbox for Matlab : Feature Extraction from Raw Audio Signals for Content-Based Music Retrieval
http://www.ai.univie.ac.at/~elias/ma/

WarpTB - Matlab Toolbox for Warped DSP
By Aki H?rm? and Matti Karjalainen
http://www.acoustics.hut.fi/software/warp/

MATLAB-related Software
http://www.dpmi.tu-graz.ac.at/~schloegl/matlab/

Biomedical Signal data formats (EEG machine specific file formats with Matlab import routines)
http://www.dpmi.tu-graz.ac.at/~schloegl/matlab/eeg/

MPEG Encoding library for MATLAB Movies (Created by David Foti)
It enables MATLAB users to read (MPGREAD) or write (MPGWRITE) MPEG movies. That should help Video Quality project.

Filter Design package
http://www.ee.ryerson.ca:8080/~mzeytin/dfp/index.html

Octave by Christophe COUVREUR (Generates normalized A-weigthing, C-weighting, octave and one-third-octave digital filters)
http://www.mathworks.com/matlabcentral/fileexchange/loadFile.do?objectType=file&objectId=69

Source Coding MATLAB Toolbox
http://www.ece.umn.edu/users/kieffer/programs.html

Bio Medical Informatics (Top)

CGH-Plotter: MATLAB Toolbox for CGH-data Analysis
Code: http://sigwww.cs.tut.fi/TICSP/CGH-Plotter/ 
Poster: http://sigwww.cs.tut.fi/TICSP/CSB2003/Posteri_CGH_Plotter.pdf

The Brain Imaging Software Toolbox
http://www.bic.mni.mcgill.ca/software/

MRI Brain Segmentation
http://www.mathworks.com/matlabcentral/fileexchange/loadFile.do?objectId=4879

Chemometrics (providing PCA) (Top)

Matlab Molecular Biology & Evolution Toolbox
(Toolbox Enables Evolutionary Biologists to Analyze and View DNA and Protein Sequences)
James J. Cai 
http://www.pmarneffei.hku.hk/mbetoolbox/

Toolbox provided by Prof. Massart research group
http://minf.vub.ac.be/~fabi/publiek/

Useful collection of routines from Prof age smilde research group
http://www-its.chem.uva.nl/research/pac

Multivariate Toolbox written by Rune Mathisen
http://www.bitjungle.com/~mvartools/index.html

Matlab code and datasets
http://www.acc.umu.se/~tnkjtg/chemometrics/dataset.html

Chaos (Top)

Chaotic Systems Toolbox 
http://www.mathworks.com/matlabcentral/fileexchange/loadFile.do?objectId=1597&objectType=file#

HOSA Toolbox
http://www.mathworks.nl/matlabcentral/fileexchange/loadFile.do?objectId=3013&objectType=file

Chemistry (Top)

MetMAP - (Metabolical Modeling, Analysis and oPtimization alias Met. M. A. P.)
http://webpages.ull.es/users/sympbst/pag_ing/pag_metmap/index.htm

DoseLab - A set of software programs for quantitative comparison of measured and computed radiation dose distributions
http://doselab.sourceforge.net

GenBank Overview
http://www.ncbi.nlm.nih.gov/Genbank/GenbankOverview.html 
Matlab: http://www.mathworks.com/matlabcentral/fileexchange/loadFile.do?objectId=1139

Coding

Code for the estimation of Scaling Exponents
http://www.cubinlab.ee.mu.oz.au/~darryl/secondorder_code.html

Control (Top)

Control Tutorial for Matlab 
http://www.engin.umich.edu/group/ctm/

Another

Communications (Top)

Channel Learning Architecture toolbox
(This Matlab toolbox is a supplement to the article "HiperLearn: A High Performance Learning Architecture")
http://www.isy.liu.se/cvl/Projects/hiperlearn/

Source Coding MATLAB Toolbox
http://www.ece.umn.edu/users/kieffer/programs.html

TCP/UDP/IP Toolbox 2.0.4
http://www.mathworks.com/matlabcentral/fileexchange/loadFile.do?objectId=345&objectType=file

Home Networking Basis: Transmission Environments and Wired/Wireless Protocols
Walter Y. Chen
http://www.mathworks.com/support/books/book5295.jsp?category=new&language=-1

MATLAB M-files and Simulink models 
http://www.mathworks.com/matlabcentral/fileexchange/loadFile.do?objectId=3834&objectType=file

Engineering (Top)

OPNML/MATLAB Facilities
http://www.opnml.unc.edu/OPNML_Matlab/

Mesh Generation
http://www.cs.cornell.edu/home/vavasis/qmg-home.html

OpenFEM : An Open-Source Finite Element Toolbox 
http://www.openfem.net/

CALFEM is an interactive computer program for teaching the finite element method (FEM)
http://www.byggmek.lth.se/Calfem/frinfo.htm

The Engineering Vibration Toolbox
http://www.cs.wright.edu/people/faculty/jslater/vtoolbox/vtoolbox.html

SaGA - Spatial and Geometric Analysis Toolbox
by Kirill K. Pankratov
http://puddle.mit.edu/~glenn/kirill/saga.html

MexCDF and NetCDF Toolbox For Matlab-5&6
http://woodshole.er.usgs.gov/staffpages/cdenham/public_html/MexCDF/nc4ml5.html

CUEDSID: Cambridge University System Identification Toolbox
http://www-control.eng.cam.ac.uk/jmm/cuedsid/

Kriging Toolbox
http://www.ai-geostats.org/software/Geostats_software/MATLAB_KRIGING_TOOLBOX.htm

Monte Carlo (Dr Nando)
http://www.cs.ubc.ca/~nando/software.html

RIOTS - The Most Powerful Optimal Control Problem Solver
http://blank.hypersurf.com/~adam/RIOTS/

Excel

MATLAB xlsheets
http://www.mathworks.com/matlabcentral/fileexchange/loadFile.do?objectId=4474&objectType=file

write2excel 
http://www.mathworks.com/matlabcentral/fileexchange/loadFile.do?objectId=4414&objectType=file

Finite Element Modeling (FEM) (Top)

OpenFEM - An Open-Source Finite Element Toolbox 
http://www.openfem.net/

NLFET - nonlinear finite element toolbox for MATLAB ( framework for setting up, solving, and interpreting results for nonlinear static and dynamic finite element analysis.)
http://nlfet.sourceforge.net/

GetFEM - C++ library for finite element methods elementary computations with a Matlab interface 
http://www.gmm.insa-tlse.fr/getfem/

FELIPE - FEA package to view results ( contains neat interface to MATLA
http://www.brunel.ac.uk/~blstmbr/felipe/

Finance (Top)

A NEW MATLAB-BASED TOOLBOX FOR COMPUTER AIDED DYNAMIC TECHNICAL TRADING
Stephanos Papadamou and George Stephanides
Department of Applied Informatics, University Of Macedonia Economic & Social Sciences, Thessaloniki, Greece
http://www.fenews.com/fen31/one_time_articles/dynamic_tech_trade_matlab6.htm 
Paper: http://econwpa.wustl.edu:8089/eps/prog/papers/0201/0201001.pdf

CompEcon Toolbox for Matlab
http://www4.ncsu.edu/~pfackler/compecon/toolbox.html

Genetic Algorithms (Top)

The Genetic Algorithm Optimization Toolbox (GAOT) for Matlab 5 
http://www.ie.ncsu.edu/mirage/GAToolBox/gaot/

Genetic Algorithm Toolbox
Written & distributed by Andy Chipperfield (Sheffield University, UK)
http://www.shef.ac.uk/uni/projects/gaipp/gatbx.html 
Manual: http://www.shef.ac.uk/~gaipp/ga-toolbox/manual.pdf

Genetic and Evolutionary Algorithm Toolbox (GEATbx)
http://www.geatbx.com

Evolutionary Algorithms for MATLAB
http://www.geatbx.com/links/ea_matlab.html

Genetic/Evolutionary Algorithms for MATLAB
http://www.systemtechnik.tu-ilmenau.de/~pohlheim/EA_Matlab/ea_matlab.html

Graphics

VideoToolbox (C routines for visual psychophysics on Macs by Denis Pelli)
http://vision.nyu.edu/VideoToolbox/ 
Paper: http://psych.nyu.edu/pelli/pubs/pelli1997videotoolbox.pdf

4D toolbox 
http://www.nmr.mgh.harvard.edu/~daniel/links/matlab/4DToolbox.html

Images (Top)

Eyelink Toolbox
http://psychtoolbox.org/eyelinktoolbox/ 
Paper: http://psychtoolbox.org/eyelinktoolbox/EyelinkToolbox.pdf

CellStats: Automated statistical analysis of color-stained cell images in Matlab
http://sigwww.cs.tut.fi/TICSP/CellStats/

SDC Morphology Toolbox for MATLAB (powerful collection of latest state-of-the-art gray-scale morphological tools that can be applied to image segmentation, non-linear filtering, pattern recognition and image analysis)
http://www.mmorph.com/

Image Acquisition Toolbox
http://www.mathworks.com/products/imaq/

Halftoning Toolbox for MATLAB
http://www.ece.utexas.edu/~bevans/projects/halftoning/toolbox/index.html

DIPimage - A Scientific Image Processing Toolbox for MATLAB
http://www.ph.tn.tudelft.nl/DIPlib/dipimage_1.html

PNM Toolbox
http://home.online.no/~pjacklam/matlab/software/pnm/index.html

Another

ICA / KICA and KPCA (Top)

ICATU Toolbox
http://mole.imm.dtu.dk/toolbox/menu.html

MISEP Linear and Nonlinear ICA Toolbox
http://neural.inesc-id.pt/~lba/ica/mitoolbox.html

Kernel Independant Component Analysis
http://www.cs.berkeley.edu/~fbach/kernel-ica/index.htm 
Matlab: kernel-ica version 1.2

KPCA- Please check the software section of kernel machines.

Kernel

Statistical Pattern Recognition Toolbox 
http://cmp.felk.cvut.cz/~xfrancv/stprtool/

MATLABArsenal A MATLAB Wrapper for Classification 
http://finalfantasyxi.inf.cs.cmu.edu/tmp/MATLABArsenal.htm

Markov (Top)

MapHMMBOX 1.1 - Matlab toolbox for Hidden Markov Modelling using Max. Aposteriori EM 
Prerequisites: Matlab 5.0, Netlab. Last Updated: 18 March 2002.
http://www.robots.ox.ac.uk/~parg/software/maphmmbox_1_1.tar

HMMBOX 4.1 - Matlab toolbox for Hidden Markov Modelling using Variational Bayes
Prerequisites: Matlab 5.0,Netlab. Last Updated: 15 February 2002..
http://www.robots.ox.ac.uk/~parg/software/hmmbox_3_2.tar 
http://www.robots.ox.ac.uk/~parg/software/hmmbox_4_1.tar

Markov Decision Process (MDP) Toolbox for Matlab
Kevin Murphy, 1999
http://www.ai.mit.edu/~murphyk/Software/MDP/MDP.zip

Markov Decision Process (MDP) Toolbox v1.0 for MATLAB
http://www.inra.fr/bia/T/MDPtoolbox/

Hidden Markov Model (HMM) Toolbox for Matlab
http://www.ai.mit.edu/~murphyk/Software/HMM/hmm.html

Bayes Net Toolbox for Matlab 
http://www.ai.mit.edu/~murphyk/Software/BNT/bnt.html

Medical (Top)

EEGLAB Open Source Matlab Toolbox for Physiological Research (formerly ICA/EEG Matlab toolbox)
http://www.sccn.ucsd.edu/~scott/ica.html

MATLAB Biomedical Signal Processing Toolbox
http://bsp.pdx.edu/Toolbox/

Powerful package for neurophysiological data analysis ( Igor Kagan webpage)
http://igoresha.virtualave.net/Matlab/Unitret.html

EEG / MRI Matlab Toolbox
http://eeg.sourceforge.net/

Microarray data analysis toolbox (MDAT): for normalization, adjustment and analysis of gene expression data.
Knowlton N, Dozmorov IM, Centola M. Department of Arthritis and Immunology, Oklahoma Medical Research Foundation, Oklahoma City, OK, USA 73104. We introduce a novel Matlab toolbox for microarray data analysis. This toolbox uses normalization based upon a normally distributed background and differential gene expression based on 5 statistical measures. The objects in this toolbox are open source and can be implemented to suit your application. AVAILABILITY: MDAT v1.0 is a Matlab toolbox and requires Matlab to run. MDAT is freely available at:
http://microarray.omrf.org/publications/2004/knowlton/MDAT.zip

MIDI (Top)

MIDI Toolbox version 1.0 (GNU General Public License)
http://www.jyu.fi/musica/miditoolbox/

Misc. (Top)

MATLAB-The Graphing Tool
http://sprg.ssl.berkeley.edu/~abrecht/matlab.html

3-D Circuits The Circuit Animation Toolbox for MATLAB
http://engineering.dartmouth.edu/other/3Dcircuits/

SendMail
http://carol.wins.uva.nl/~portegie/matlab/sendmail/

Coolplot
http://www.reimeika.ca/marco/matlab/coolplots.html

MPI (Matlab Parallel Interface)

Cornell Multitask Toolbox for MATLAB
http://www.tc.cornell.edu/Services/Software/CMTM/

Beolab Toolbox for v6.5
Thomas Abrahamsson (Professor, Chalmers University of Technology, Applied Mechanics, G?teborg, Sweden)
http://www.mathworks.nl/matlabcentral/fileexchange/loadFile.do?objectId=1216&objectType=file

PARMATLAB

Neural Networks (Top)

SOM Toolbox 
http://www.cis.hut.fi/projects/somtoolbox/

Bayes Net Toolbox for Matlab
http://www.ai.mit.edu/~murphyk/Software/BNT/bnt.html

NetLab
http://www.ncrg.aston.ac.uk/netlab/

Random Neural Networks
http://www.cs.ucf.edu/~ahossam/rnnsimv2/ 
ftp:

NNSYSID Toolbox (tools for neural network based identification of nonlinear dynamic systems)
http://www.iau.dtu.dk/research/control/nnsysid.html

Oceanography (Top)

WAFO. Wave Analysis for Fatigue and Oceanography
http://www.maths.lth.se/matstat/wafo/

ADCP toolbox for MATLAB (USGS, USA)
Presented at the Hydroacoustics Workshop in Tampa and at ADCP's in Action in San Diego
http://woodshole.er.usgs.gov/operations/stg/pubs/ADCPtools

SEA-MAT - Matlab Tools for Oceanographic Analysis
A collaborative effort to organize and distribute Matlab tools for the Oceanographic Community
http://sea-mat.whoi.edu/

Ocean Toolbox
http://www.mar.dfo-mpo.gc.ca/science/ocean/epsonde/programming.html

EUGENE D. GALLAGHER
(Associate Professor, Environmental, Coastal & Ocean Sciences)
http://www.es.umb.edu/edgwebp.htm

Optimization (Top)

MODCONS - a MATLAB Toolbox for Multi-Objective Control System Design 
http://www.eee.kcl.ac.uk/mecheng/jfw/modcons.html

Lazy Learning Package
http://iridia.ulb.ac.be/~lazy/

SDPT3 version 3.02 -- a MATLAB software for semidefinite-quadratic-linear programming
http://www.math.nus.edu.sg/~mattohkc/sdpt3.html

Minimum Enclosing Balls: Matlab Code 
http://www.compgeom.com/meb/

SOSTOOLS Sum of Squares Optimization Toolbox for MATLAB User’s guide
http://www.cds.caltech.edu/sostools/sostools.pdf

PSOt - a Particle Swarm Optimization Toolbox for use with Matlab
By Brian Birge ... A Particle Swarm Optimization Toolbox (PSOt) for use with the Matlab scientific programming environment has been developed. PSO is
introduced briefly and then the use of the toolbox is explained with some examples. A link to downloadable code is provided.

Plot

http://globec.whoi.edu/software/plotting/gbplot/

Signal Processing (Top)

Filter Design with Motorola DSP56K
http://www.ee.ryerson.ca:8080/~mzeytin/dfp/index.html

Change Detection and Adaptive Filtering Toolbox
http://www.sigmoid.se/

Signal Processing Toolbox
http://www.mathworks.com/products/signal/

ICATU Toolbox
http://mole.imm.dtu.dk/toolbox/menu.html

Time-Frequency Toolbox for Matlab
http://crttsn.univ-nantes.fr/~auger/tftb.html

VoiceBox - Speech Processing Toolbox
http://www.ee.ic.ac.uk/hp/staff/dmb/voicebox/voicebox.html

Least Squared - Support Vector Machines (LS-SVM) 
http://www.esat.kuleuven.ac.be/sista/lssvmlab/

WaveLab802 : the Wavelet Toolbox
By David Donoho, Mark Reynold Duncan, Xiaoming Huo, Ofer Levi
http://www-stat.stanford.edu/~wavelab/

Time-series Matlab scripts
http://wise-obs.tau.ac.il/~eran/MATLAB/TimeseriesCon.html

Uvi_Wave Wavelet Toolbox Home Page 
http://www.gts.tsc.uvigo.es/~wavelets/index.html

Another

Support Vector Machine (Top)

MATLAB Support Vector Machine Toolbox
Dr Gavin Cawley
School of Information Systems, University of East Anglia
http://theoval.sys.uea.ac.uk/~gcc/svm/toolbox/

LS-SVM - SISTA

SVM toolboxes
http://www.cs.wisc.edu/dmi/svm/

LSVM Lagrangian Support Vector Machine
http://www.cs.wisc.edu/dmi/lsvm/

Statistics (Top)

Logistic regression 
http://www.spatial-econometrics.com/

SAGA
http://globec.whoi.edu/software/saga/

Multi-Parametric Toolbox (MPT) A tool (not only) for multi-parametric optimization.
http://control.ee.ethz.ch/~mpt/

ARfit: A Matlab package for the estimation of parameters and eigenmodes of multivariate autoregressive models
http://www.mat.univie.ac.at/~neum/software/arfit/

The Dimensional Analysis Toolbox for MATLAB
Home: http://www.sbrs.de/ 
Paper: http://www.isd.uni-stuttgart.de/~brueckner/Papers/similarity2002.pdf

FATHOM for Matlab 
http://www.rsmas.miami.edu/personal/djones/

PLS-toolbox
http://www.eigenvector.com

Multivariate analysis toolbox (N-way Toolbox - paper)
http://www.models.kvl.dk/source/nwaytoolbox/index.asp

Classification Toolbox for Matlab
http://tiger.technion.ac.il/~eladyt/classification/index.htm

Matlab toolbox for Robust Calibration
http://www.wis.kuleuven.ac.be/stat/robust/toolbox.html

Statistical Parametric Mapping
http://www.fil.ion.ucl.ac.uk/spm/spm2.html

EVIM: A Software Package for Extreme Value Analysis in Matlab 
by Ramazan Gen?ay, Faruk Selcuk and Abdurrahman Ulugulyagci, 2001.
Manual (pdf file) evim.pdf - Software (zip file) evim.zip

Time Series Analysis
http://www.dpmi.tu-graz.ac.at/~schloegl/matlab/tsa/

Bayes Net Toolbox for Matlab
Written by Kevin Murphy
http://www.ai.mit.edu/~murphyk/Software/BNT/bnt.html 
Other: http://www.isp.pitt.edu/information/toolboxes.html

ARfit: A Matlab package for the estimation of parameters and eigenmodes of multivariate autoregressive models
http://www.gps.caltech.edu/~tapio/arfit/

M-Fit
http://www.ill.fr/tas/matlab/doc/mfit4/mfit.html

Dimensional Analysis Toolbox for Matlab
http://www.sbrs.net/

The NaN-toolbox: A statistic-toolbox for Octave and Matlab?
... handles data with and without MISSING VALUES. 
http://www-dpmi.tu-graz.ac.at/~schloegl/matlab/NaN/

Iterative Methods for Optimization: Matlab Codes
http://www4.ncsu.edu/~ctk/matlab_darts.html

Multiscale Shape Analysis (MSA) Matlab Toolbox 2000
http://www.vision.ime.usp.br/~cesar/projects/multiscale/

Multivariate Ecological & Oceanographic Data Analysis (FATHOM)
From David Jones
http://www.rsmas.miami.edu/personal/djones/

glmlab (Generalized Linear Models in MATLA
http://www.sci.usq.edu.au/staff/dunn/glmlab/glmlab.html

http://www.wis.kuleuven.ac.be/stat/robust/toolbox.html

http://www.supercrawler.com/Science/Math/Software/MATLAB/

svm

SVM and Kernel Methods Matlab Toolbox
http://asi.insa-rouen.fr/~arakotom/toolbox/index 
 
MATLAB Support Vector Machine Toolbox
Dr Gavin Cawley
School of Information Systems, University of East Anglia
http://theoval.sys.uea.ac.uk/~gcc/svm/toolbox/  
 

LS-SVM - SISTA
http://www.esat.kuleuven.ac.be/sista/lssvmlab/ 
 

SVM toolboxes
http://www.cs.wisc.edu/dmi/svm/ 

LSVM Lagrangian Support Vector Machine
http://www.cs.wisc.edu/dmi/lsvm